Python Module Index

p
 
p
pydigree
    pydigree.common
    pydigree.cydigree
    pydigree.cydigree.cyfuncs
    pydigree.cydigree.datastructures
    pydigree.cydigree.sparsearray
    pydigree.cydigree.vcfparse
    pydigree.datastructures
    pydigree.exceptions
    pydigree.genotypes
    pydigree.genotypes.alleles
    pydigree.genotypes.chromosometemplate
    pydigree.genotypes.genoabc
    pydigree.genotypes.labelledalleles
    pydigree.genotypes.sparsealleles
    pydigree.ibs
    pydigree.individual
    pydigree.individualcontainer
    pydigree.io
    pydigree.io.base
    pydigree.io.beagle
    pydigree.io.genomesimla
    pydigree.io.kinship
    pydigree.io.plink
    pydigree.io.sgs
    pydigree.io.smartopen
    pydigree.io.vcf
    pydigree.paths
    pydigree.pedigree
    pydigree.pedigreecollection
    pydigree.phenotypes
    pydigree.population
    pydigree.rand
    pydigree.recombination
    pydigree.sgs
    pydigree.sgs.sgs
    pydigree.simulation
    pydigree.simulation.chromosomepool
    pydigree.simulation.genedrop
    pydigree.simulation.genedrop.constrained_mendelian
    pydigree.simulation.genedrop.naivegenedrop
    pydigree.simulation.genedrop.simulation
    pydigree.simulation.mating
    pydigree.simulation.trait
    pydigree.stats
    pydigree.stats.mathfuncs
    pydigree.stats.mixedmodel
    pydigree.stats.mixedmodel.likelihood
    pydigree.stats.mixedmodel.maximization
    pydigree.stats.mixedmodel.mixedmodel
    pydigree.stats.mixedmodel.mixin
    pydigree.stats.stattests
    pydigree.stats.variancecomponents