pydigree

• pydigree package
  • Subpackages
    • pydigree.cydigree package
      • Submodules
      • pydigree.cydigree.cyfuncs module
      • pydigree.cydigree.datastructures module
      • pydigree.cydigree.sparsearray module
      • pydigree.cydigree.varianttree module
      • pydigree.cydigree.vcfparse module
      • Module contents
    • pydigree.datastructures package
      • Module contents
    • pydigree.genotypes package
      • Submodules
      • pydigree.genotypes.alleles module
      • pydigree.genotypes.chromosometemplate module
      • pydigree.genotypes.genoabc module
      • pydigree.genotypes.labelledalleles module
      • pydigree.genotypes.sparsealleles module
      • Module contents
    • pydigree.io package
      • Submodules
      • pydigree.io.base module
      • pydigree.io.beagle module
      • pydigree.io.genomesimla module
      • pydigree.io.kinship module
      • pydigree.io.plink module
      • pydigree.io.sgs module
      • pydigree.io.smartopen module
      • pydigree.io.vcf module
      • Module contents
    • pydigree.sgs package
      • Submodules
      • pydigree.sgs.sgs module
      • Module contents
    • pydigree.simulation package
      • Subpackages
      • Submodules
      • pydigree.simulation.chromosomepool module
      • pydigree.simulation.mating module
      • pydigree.simulation.trait module
      • Module contents
    • pydigree.stats package
      • Subpackages
      • Submodules
      • pydigree.stats.mathfuncs module
      • pydigree.stats.stattests module
      • pydigree.stats.variancecomponents module
      • Module contents
  • Submodules
  • pydigree.common module
  • pydigree.exceptions module
  • pydigree.ibs module
  • pydigree.individual module
  • pydigree.individualcontainer module
  • pydigree.paths module
  • pydigree.pedigree module
  • pydigree.pedigreecollection module
  • pydigree.phenotypes module
  • pydigree.population module
  • pydigree.rand module
  • pydigree.recombination module
  • Module contents