Welcome to pydigree’s documentation!

• Basic datastructures
  • Individuals
  • Collections of Individuals
  • Genotypes
• File I/O
  • Pedigree Files
  • PLINK format
  • VCF format
• Pedigrees, Relationships, and Genealogies
  • Measures of relatedness
  • Paths through Genealogies
• Forward-time Simulation
  • Simulating Phenotypes
  • Mating Schemes
  • Chromosome Pools
• Variance Components Estimation
• Bundled Programs
  • Family Datasets
  • Data Simulation

Indices and tables

• pydigree
• Index
• Module Index
• Search Page